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  4. Sequence
  5. Smo103994

Smo103994


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component


Gene families : OG0001283 (Archaeplastida) Phylogenetic Tree(s): OG0001283_tree ,
OG_05_0001263 (LandPlants) Phylogenetic Tree(s): OG_05_0001263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo103994
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00107780 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
AMTR_s00061p00187310 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
AT1G80750 No alias Ribosomal protein L30/L7 family protein 0.07 Archaeplastida
AT2G01250 No alias Ribosomal protein L30/L7 family protein 0.09 Archaeplastida
Cpa|evm.model.tig00020909.42 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
Cre12.g537800 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
GSVIVT01029288001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
GSVIVT01029655001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
GSVIVT01034230001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
Gb_20650 No alias component RPL7 of LSU proteome component 0.04 Archaeplastida
LOC_Os04g51630.1 No alias component RPL7 of LSU proteome component 0.09 Archaeplastida
LOC_Os08g13690.1 No alias component RPL7 of LSU proteome component 0.1 Archaeplastida
MA_10428203g0010 No alias component RPL7 of LSU proteome component 0.02 Archaeplastida
MA_109845g0010 No alias component RPL7 of LSU proteome component 0.04 Archaeplastida
MA_47548g0010 No alias component RPL7 of LSU proteome component 0.07 Archaeplastida
Mp3g13040.1 No alias component RPL7 of LSU proteome component 0.1 Archaeplastida
Pp3c1_37460V3.1 No alias Ribosomal protein L30/L7 family protein 0.07 Archaeplastida
Pp3c1_39470V3.1 No alias Ribosomal protein L30/L7 family protein 0.09 Archaeplastida
Pp3c2_1610V3.1 No alias Ribosomal protein L30/L7 family protein 0.07 Archaeplastida
Pp3c2_5820V3.1 No alias Ribosomal protein L30/L7 family protein 0.05 Archaeplastida
Solyc03g117060.4.1 No alias component RPL7 of LSU proteome component 0.02 Archaeplastida
Solyc06g068400.3.1 No alias component RPL7 of LSU proteome component 0.05 Archaeplastida
Solyc07g008370.4.1 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e003731_P002 No alias component RPL7 of LSU proteome component 0.04 Archaeplastida
Zm00001e007015_P002 No alias component RPL7 of LSU proteome component 0.08 Archaeplastida
Zm00001e022294_P001 No alias component RPL7 of LSU proteome component 0.09 Archaeplastida
Zm00001e040072_P002 No alias component RPL7 of LSU proteome component 0.05 Archaeplastida
Zm00001e041593_P001 No alias component RPL7 of LSU proteome component 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004017 adenylate kinase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0050145 nucleoside monophosphate kinase activity IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR016082 Ribosomal_L30_ferredoxin-like 88 137
No external refs found!