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  5. Smo104768

Smo104768


Description : Lipid metabolism.fatty acid synthesis.mitochondrial Type II fatty acid synthase (mtFAS) system.acyl carrier protein (mtACP)


Gene families : OG0001245 (Archaeplastida) Phylogenetic Tree(s): OG0001245_tree ,
OG_05_0001152 (LandPlants) Phylogenetic Tree(s): OG_05_0001152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo104768
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00140290 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.mitochondrial Type... 0.16 Archaeplastida
AMTR_s00095p00035180 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.mitochondrial Type... 0.05 Archaeplastida
AT1G65290 mtACP2 mitochondrial acyl carrier protein 2 0.17 Archaeplastida
Cpa|evm.model.tig00001107.15 No alias Lipid metabolism.fatty acid synthesis.mitochondrial Type... 0.02 Archaeplastida
GSVIVT01033824001 No alias Lipid metabolism.fatty acid synthesis.mitochondrial Type... 0.03 Archaeplastida
Gb_24265 No alias acyl carrier protein (mtACP) 0.02 Archaeplastida
LOC_Os03g22950.1 No alias acyl carrier protein (mtACP) 0.17 Archaeplastida
MA_10430607g0010 No alias acyl carrier protein (mtACP) 0.06 Archaeplastida
MA_27820g0010 No alias acyl carrier protein (mtACP) 0.02 Archaeplastida
MA_3574g0020 No alias acyl carrier protein (mtACP) 0.09 Archaeplastida
Pp3c20_7570V3.1 No alias mitochondrial acyl carrier protein 2 0.07 Archaeplastida
Pp3c23_19250V3.1 No alias mitochondrial acyl carrier protein 2 0.04 Archaeplastida
Pp3c24_18560V3.1 No alias mitochondrial acyl carrier protein 2 0.03 Archaeplastida
Solyc01g088570.3.1 No alias acyl carrier protein (mtACP) 0.03 Archaeplastida
Solyc11g012180.2.1 No alias acyl carrier protein (mtACP) 0.03 Archaeplastida
Zm00001e033120_P001 No alias acyl carrier protein (mtACP) 0.04 Archaeplastida
Zm00001e038781_P001 No alias acyl carrier protein (mtACP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
CC GO:0000152 nuclear ubiquitin ligase complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005680 anaphase-promoting complex IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR009081 PP-bd_ACP 34 87
No external refs found!