Description : RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.SPT3/TAF13 component
Gene families : OG0005638 (Archaeplastida) Phylogenetic Tree(s): OG0005638_tree ,
OG_05_0005917 (LandPlants) Phylogenetic Tree(s): OG_05_0005917_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo106159 | |
Cluster | HCCA: Cluster_165 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000144.167 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | Archaeplastida | |
MA_97822g0010 | No alias | component SPT3/TAF13 of SAGA transcription co-activator... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006366 | transcription by RNA polymerase II | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0005096 | GTPase activator activity | IEP | Neighborhood |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | Neighborhood |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Neighborhood |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Neighborhood |
MF | GO:0008047 | enzyme activator activity | IEP | Neighborhood |
BP | GO:0009116 | nucleoside metabolic process | IEP | Neighborhood |
BP | GO:0009117 | nucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009119 | ribonucleoside metabolic process | IEP | Neighborhood |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | Neighborhood |
BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0019637 | organophosphate metabolic process | IEP | Neighborhood |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | Neighborhood |
MF | GO:0030234 | enzyme regulator activity | IEP | Neighborhood |
MF | GO:0030695 | GTPase regulator activity | IEP | Neighborhood |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Neighborhood |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Neighborhood |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Neighborhood |
BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Neighborhood |
BP | GO:0042278 | purine nucleoside metabolic process | IEP | Neighborhood |
BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Neighborhood |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Neighborhood |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Neighborhood |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0098772 | molecular function regulator | IEP | Neighborhood |
BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Neighborhood |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003195 | TFIID_TAF13 | 18 | 107 |
No external refs found! |