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  5. Smo107782

Smo107782


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0003583 (Archaeplastida) Phylogenetic Tree(s): OG0003583_tree ,
OG_05_0003750 (LandPlants) Phylogenetic Tree(s): OG_05_0003750_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo107782
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00157p00048060 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01022967001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os09g28120.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida
MA_6953061g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g104230.4.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.05 Archaeplastida
Zm00001e003778_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.04 Archaeplastida
Zm00001e009911_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009451 RNA modification IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 4 40
No external refs found!