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  5. AMTR_s00012p00251300

AMTR_s00012p00251300 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.253

No description available


Gene families : OG0003839 (Archaeplastida) Phylogenetic Tree(s): OG0003839_tree ,
OG_05_0003451 (LandPlants) Phylogenetic Tree(s): OG_05_0003451_tree ,
OG_06_0003231 (SeedPlants) Phylogenetic Tree(s): OG_06_0003231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00251300
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034132001 No alias No description available 0.03 Archaeplastida
Pp3c16_19440V3.1 No alias Fes1A 0.03 Archaeplastida
Smo124123 No alias No description available 0.02 Archaeplastida
Solyc09g011030.3.1 No alias nucleotide exchange factor (FES1) 0.04 Archaeplastida
Zm00001e001201_P001 No alias nucleotide exchange factor (FES1) 0.03 Archaeplastida
Zm00001e006200_P001 No alias nucleotide exchange factor (FES1) 0.04 Archaeplastida
Zm00001e011738_P002 No alias nucleotide exchange factor (FES1) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0010498 proteasomal protein catabolic process IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
CC GO:0030915 Smc5-Smc6 complex IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
MF GO:0047800 cysteamine dioxygenase activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
CC GO:0106068 SUMO ligase complex IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!