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Description : Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.AGO siRNA-integrating factor
Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0000677 (LandPlants) Phylogenetic Tree(s): OG_05_0000677_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo110151 | |
| Cluster | HCCA: Cluster_207 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os02g58490.1 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | Archaeplastida | |
| LOC_Os06g39640.1 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | Archaeplastida | |
| MA_161177g0010 | No alias | Protein argonaute 7 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
| Pp3c1_35770V3.1 | No alias | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.03 | Archaeplastida | |
| Pp3c2_4060V3.1 | No alias | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.03 | Archaeplastida | |
| Zm00001e037347_P002 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0008483 | transaminase activity | IEP | Neighborhood |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Neighborhood |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
| BP | GO:0019748 | secondary metabolic process | IEP | Neighborhood |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
| BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| BP | GO:0046937 | phytochelatin metabolic process | IEP | Neighborhood |
| BP | GO:0046938 | phytochelatin biosynthetic process | IEP | Neighborhood |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
| MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003100 | PAZ_dom | 309 | 434 |
| No external refs found! |