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  5. Smo111471

Smo111471


Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana


Gene families : OG0005064 (Archaeplastida) Phylogenetic Tree(s): OG0005064_tree ,
OG_05_0005093 (LandPlants) Phylogenetic Tree(s): OG_05_0005093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo111471
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01029336001 No alias Pentatricopeptide repeat-containing protein At1g74630... 0.01 Archaeplastida
LOC_Os01g65840.1 No alias Pentatricopeptide repeat-containing protein At3g21470... 0.01 Archaeplastida
LOC_Os02g41560.1 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.01 Archaeplastida
MA_29579g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.01 Archaeplastida
Solyc08g079640.3.1 No alias Pentatricopeptide repeat-containing protein At3g51320... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Neighborhood
BP GO:0006282 regulation of DNA repair IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
BP GO:2001020 regulation of response to DNA damage stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 36 59
No external refs found!