Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/DBB transcription factor
Gene families : OG0000461 (Archaeplastida) Phylogenetic Tree(s): OG0000461_tree ,
OG_05_0004244 (LandPlants) Phylogenetic Tree(s): OG_05_0004244_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo111647 | |
Cluster | HCCA: Cluster_40 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00066p00204180 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | Archaeplastida | |
AMTR_s00182p00043350 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2C2... | 0.04 | Archaeplastida | |
AT2G31380 | STH | salt tolerance homologue | 0.08 | Archaeplastida | |
GSVIVT01024173001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.04 | Archaeplastida | |
LOC_Os04g41560.2 | No alias | transcription factor (BBX-DBB) | 0.02 | Archaeplastida | |
Solyc06g073180.3.1 | No alias | transcription factor (BBX-DBB) | 0.03 | Archaeplastida | |
Zm00001e007720_P001 | No alias | transcription factor (BBX-DBB) | 0.05 | Archaeplastida | |
Zm00001e010221_P001 | No alias | transcription factor (BBX-DBB) | 0.04 | Archaeplastida | |
Zm00001e015053_P001 | No alias | No annotation | 0.03 | Archaeplastida | |
Zm00001e022915_P001 | No alias | transcription factor (BBX-DBB) | 0.02 | Archaeplastida | |
Zm00001e023122_P002 | No alias | transcription factor (BBX-DBB) | 0.02 | Archaeplastida | |
Zm00001e034791_P001 | No alias | transcription factor (BBX-DBB) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005779 | integral component of peroxisomal membrane | IEP | Neighborhood |
MF | GO:0008289 | lipid binding | IEP | Neighborhood |
BP | GO:0009767 | photosynthetic electron transport chain | IEP | Neighborhood |
MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
BP | GO:0022900 | electron transport chain | IEP | Neighborhood |
CC | GO:0031082 | BLOC complex | IEP | Neighborhood |
CC | GO:0031083 | BLOC-1 complex | IEP | Neighborhood |
CC | GO:0031231 | intrinsic component of peroxisomal membrane | IEP | Neighborhood |
CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Neighborhood |
CC | GO:0031301 | integral component of organelle membrane | IEP | Neighborhood |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044438 | microbody part | IEP | Neighborhood |
CC | GO:0044439 | peroxisomal part | IEP | Neighborhood |
CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
CC | GO:0044445 | cytosolic part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Neighborhood |
MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000315 | Znf_B-box | 3 | 42 |
No external refs found! |