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  5. Smo111719

Smo111719


Description : Senescence/dehydration-associated protein At4g35985, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000668 (Archaeplastida) Phylogenetic Tree(s): OG0000668_tree ,
OG_05_0000954 (LandPlants) Phylogenetic Tree(s): OG_05_0000954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo111719
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AT3G21600 No alias Senescence/dehydration-associated protein-related 0.03 Archaeplastida
GSVIVT01015304001 No alias Senescence/dehydration-associated protein At4g35985,... 0.03 Archaeplastida
Gb_21239 No alias Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic... 0.02 Archaeplastida
Gb_39730 No alias Senescence/dehydration-associated protein At4g35985,... 0.04 Archaeplastida
Gb_40006 No alias Senescence/dehydration-associated protein At4g35985,... 0.02 Archaeplastida
LOC_Os01g52480.1 No alias Senescence/dehydration-associated protein At4g35985,... 0.03 Archaeplastida
LOC_Os03g13840.2 No alias Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic... 0.03 Archaeplastida
MA_4456863g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6622744g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_817099g0010 No alias Senescence/dehydration-associated protein At3g51250... 0.03 Archaeplastida
MA_8979358g0010 No alias Senescence/dehydration-associated protein At4g35985,... 0.04 Archaeplastida
Solyc12g008460.2.1 No alias Senescence/dehydration-associated protein At4g35985,... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR009686 Senescence/spartin 206 373
No external refs found!