Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.299
Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIa basal transcription factor complex.large subunit
Gene families : OG0002576 (Archaeplastida) Phylogenetic Tree(s): OG0002576_tree ,
OG_05_0002369 (LandPlants) Phylogenetic Tree(s): OG_05_0002369_tree ,
OG_06_0013753 (SeedPlants) Phylogenetic Tree(s): OG_06_0013753_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00012p00256750 | |
Cluster | HCCA: Cluster_236 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Gb_34393 | No alias | large subunit of TFIIa basal transcription factor complex | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005672 | transcription factor TFIIA complex | IEA | Interproscan |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004855 | TFIIA_asu/bsu | 44 | 175 |
No external refs found! |