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  5. AMTR_s00012p00257450

AMTR_s00012p00257450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.302

Description : AT-hook motif nuclear-localized protein 20 OS=Arabidopsis thaliana


Gene families : OG0000411 (Archaeplastida) Phylogenetic Tree(s): OG0000411_tree ,
OG_05_0000205 (LandPlants) Phylogenetic Tree(s): OG_05_0000205_tree ,
OG_06_0000150 (SeedPlants) Phylogenetic Tree(s): OG_06_0000150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00257450
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00075410 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 16... 0.03 Archaeplastida
AMTR_s00135p00017880 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 17... 0.04 Archaeplastida
AT2G45430 AHL22 AT-hook motif nuclear-localized protein 22 0.02 Archaeplastida
AT3G55560 AHL15, AGF2 AT-hook protein of GA feedback 2 0.02 Archaeplastida
AT3G60870 AHL18 AT-hook motif nuclear-localized protein 18 0.03 Archaeplastida
AT4G14465 AHL20 AT-hook motif nuclear-localized protein 20 0.03 Archaeplastida
Gb_15730 No alias AT-hook motif nuclear-localized protein 16... 0.03 Archaeplastida
LOC_Os02g48320.3 No alias AT-hook motif nuclear-localized protein 25... 0.07 Archaeplastida
LOC_Os04g50030.1 No alias AT-hook motif nuclear-localized protein 23... 0.05 Archaeplastida
LOC_Os08g06320.1 No alias AT-hook motif nuclear-localized protein 23... 0.03 Archaeplastida
MA_12232g0010 No alias AT-hook motif nuclear-localized protein 20... 0.02 Archaeplastida
MA_2613706g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_291092g0010 No alias AT-hook motif nuclear-localized protein 20... 0.05 Archaeplastida
MA_41289g0010 No alias AT-hook motif nuclear-localized protein 17... 0.04 Archaeplastida
MA_5409554g0010 No alias No annotation 0.03 Archaeplastida
Smo404546 No alias AT-hook motif nuclear-localized protein 20... 0.03 Archaeplastida
Smo57074 No alias AT-hook motif nuclear-localized protein 22... 0.03 Archaeplastida
Solyc04g076220.3.1 No alias AT-hook motif nuclear-localized protein 17... 0.03 Archaeplastida
Solyc08g007560.3.1 No alias AT-hook motif nuclear-localized protein 22... 0.03 Archaeplastida
Solyc12g087950.1.1 No alias AT-hook motif nuclear-localized protein 17... 0.07 Archaeplastida
Zm00001e001193_P001 No alias AT-hook motif nuclear-localized protein 22... 0.03 Archaeplastida
Zm00001e041402_P001 No alias AT-hook motif nuclear-localized protein 21... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005175 PPC_dom 98 214
No external refs found!