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  5. AMTR_s00012p00257960

AMTR_s00012p00257960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.304

Description : Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0006735 (Archaeplastida) Phylogenetic Tree(s): OG0006735_tree ,
OG_05_0007892 (LandPlants) Phylogenetic Tree(s): OG_05_0007892_tree ,
OG_06_0010095 (SeedPlants) Phylogenetic Tree(s): OG_06_0010095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00257960
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g05080.1 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 Archaeplastida
MA_10232509g0010 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.01 Archaeplastida
MA_503287g0010 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.01 Archaeplastida
Zm00001e025798_P001 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 138 173
No external refs found!