Description : Vesicle trafficking.endomembrane trafficking.vacuolar sorting.AP-4 vacuole cargo adaptor complex.AP4S small sigma subunit
Gene families : OG0000560 (Archaeplastida) Phylogenetic Tree(s): OG0000560_tree ,
OG_05_0007286 (LandPlants) Phylogenetic Tree(s): OG_05_0007286_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Smo113878 | |
Cluster | HCCA: Cluster_144 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os03g59660.1 | No alias | small subunit sigma of AP-1 trans-Golgi network cargo... | 0.06 | Archaeplastida | |
Smo446561 | No alias | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.03 | Archaeplastida | |
Solyc04g081410.3.1 | No alias | small subunit sigma of AP-2 cargo adaptor complex | 0.03 | Archaeplastida | |
Solyc11g005220.2.1 | No alias | small subunit sigma of AP-1 trans-Golgi network cargo... | 0.04 | Archaeplastida | |
Zm00001e005895_P003 | No alias | small subunit sigma of AP-1 trans-Golgi network cargo... | 0.06 | Archaeplastida | |
Zm00001e038638_P001 | No alias | small subunit sigma of AP-3 Golgi to vacuole cargo... | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005509 | calcium ion binding | IEP | Neighborhood |
CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
CC | GO:0005839 | proteasome core complex | IEP | Neighborhood |
BP | GO:0006790 | sulfur compound metabolic process | IEP | Neighborhood |
BP | GO:0006812 | cation transport | IEP | Neighborhood |
BP | GO:0008202 | steroid metabolic process | IEP | Neighborhood |
BP | GO:0015672 | monovalent inorganic cation transport | IEP | Neighborhood |
BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
BP | GO:0016125 | sterol metabolic process | IEP | Neighborhood |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Neighborhood |
BP | GO:0022607 | cellular component assembly | IEP | Neighborhood |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Neighborhood |
BP | GO:0034220 | ion transmembrane transport | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
BP | GO:0051186 | cofactor metabolic process | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
BP | GO:0098655 | cation transmembrane transport | IEP | Neighborhood |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Neighborhood |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Neighborhood |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Neighborhood |
BP | GO:1902600 | proton transmembrane transport | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022775 | AP_mu_sigma_su | 3 | 141 |
No external refs found! |