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  4. Sequence
  5. Smo114014

Smo114014


Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase


Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo114014
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00003p00239700 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
AMTR_s00021p00242180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
AMTR_s00033p00227850 evm_27.TU.AmTr_v1... Probable pectinesterase/pectinesterase inhibitor 21... 0.02 Archaeplastida
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00071p00109420 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00105p00078750 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00129p00028250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00129p00031200 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00129p00073090 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.02 Archaeplastida
AT2G43050 ATPMEPCRD Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT2G47550 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT3G10710 RHS12 root hair specific 12 0.02 Archaeplastida
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Archaeplastida
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Archaeplastida
AT4G02320 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT4G33220 PME44, ATPME44 pectin methylesterase 44 0.07 Archaeplastida
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT5G09760 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT5G20860 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G27870 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT5G49180 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.02 Archaeplastida
GSVIVT01015000001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01017687001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01027652001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01028264001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01031165001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_01422 No alias pectin methylesterase 0.05 Archaeplastida
Gb_10523 No alias pectin methylesterase 0.03 Archaeplastida
Gb_15174 No alias pectin methylesterase 0.02 Archaeplastida
Gb_18512 No alias pectin methylesterase 0.05 Archaeplastida
Gb_21388 No alias pectin methylesterase 0.04 Archaeplastida
Gb_24564 No alias pectin methylesterase 0.01 Archaeplastida
Gb_25439 No alias pectin methylesterase 0.03 Archaeplastida
Gb_28387 No alias pectin methylesterase 0.04 Archaeplastida
Gb_35881 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g65790.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os02g18650.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os02g54190.1 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os03g18860.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os05g29790.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os06g09340.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os07g47830.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os08g34900.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g07090.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g08750.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g36240.1 No alias pectin methylesterase 0.02 Archaeplastida
MA_10332149g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10372207g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_133919g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_158002g0020 No alias pectin methylesterase 0.02 Archaeplastida
MA_177599g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_2017g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_26888g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_354248g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_54974g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_648837g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_86577g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_931259g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_9367g0020 No alias pectin methylesterase 0.01 Archaeplastida
MA_96515g0010 No alias pectin methylesterase 0.05 Archaeplastida
Pp3c17_6440V3.1 No alias pectin methylesterase PCR fragment F 0.07 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.09 Archaeplastida
Pp3c21_22110V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c26_2170V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Pp3c4_22420V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Archaeplastida
Smo154356 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Smo266995 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Smo89509 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Solyc01g066390.4.1 No alias Probable pectinesterase/pectinesterase inhibitor 58... 0.02 Archaeplastida
Solyc01g066420.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc01g091050.4.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc01g099960.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc02g014300.2.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g080220.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc02g081990.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc03g078100.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g083870.4.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc06g009180.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc06g034360.2.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc07g017600.3.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc07g064190.3.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc09g075350.4.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc11g005750.2.1 No alias pectin methylesterase 0.01 Archaeplastida
Solyc12g099410.2.1 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e004056_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e009863_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e014142_P001 No alias pectin methylesterase 0.01 Archaeplastida
Zm00001e017514_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e017515_P001 No alias pectin methylesterase 0.06 Archaeplastida
Zm00001e025576_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e034231_P001 No alias pectin methylesterase 0.05 Archaeplastida
Zm00001e035838_P001 No alias pectin methylesterase 0.05 Archaeplastida
Zm00001e035932_P003 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e041006_P001 No alias pectin methylesterase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 9 68
No external refs found!