Smo114102


Description : Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana


Gene families : OG0009320 (Archaeplastida) Phylogenetic Tree(s): OG0009320_tree ,
OG_05_0103105 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo114102
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034707001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_02544 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_33727 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
MA_51694g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 Archaeplastida
MA_733561g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 452 477
No external refs found!