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  5. Smo116484

Smo116484


Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0011976 (Archaeplastida) Phylogenetic Tree(s): OG0011976_tree ,
OG_05_0034085 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo116484
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Gb_25843 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.03 Archaeplastida
MA_470679g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.01 Archaeplastida
MA_65862g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 234 282
No external refs found!