1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo116559

Smo116559


Description : Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0014395 (Archaeplastida) Phylogenetic Tree(s): OG0014395_tree ,
OG_05_0017530 (LandPlants) Phylogenetic Tree(s): OG_05_0017530_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo116559
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
MA_111876g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
MA_122546g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.01 Archaeplastida
MA_156938g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004529 exodeoxyribonuclease activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Neighborhood
MF GO:0008409 5'-3' exonuclease activity IEP Neighborhood
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 368 392
No external refs found!