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  5. Smo118904

Smo118904


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo118904
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00111940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
LOC_Os02g48060.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_78485g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Mp1g01110.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Solyc06g062460.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e020012_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 21 67
No external refs found!