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  5. AMTR_s00012p00263770

AMTR_s00012p00263770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.347

Description : Pathogenesis-related protein PR-1 OS=Medicago truncatula


Gene families : OG0000081 (Archaeplastida) Phylogenetic Tree(s): OG0000081_tree ,
OG_05_0000056 (LandPlants) Phylogenetic Tree(s): OG_05_0000056_tree ,
OG_06_0014982 (SeedPlants) Phylogenetic Tree(s): OG_06_0014982_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00263770
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263870 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.05 Archaeplastida
AT2G14580 PRB1, ATPRB1 basic pathogenesis-related protein 1 0.02 Archaeplastida
AT4G07820 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
AT5G26130 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Archaeplastida
LOC_Os07g03620.1 No alias Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.02 Archaeplastida
MA_317009g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_598524g0010 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 93.2) 0.03 Archaeplastida
Mp2g15990.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 Archaeplastida
Mp3g14100.1 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp5g12510.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.03 Archaeplastida
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.02 Archaeplastida
Mp6g06340.1 No alias Basic form of pathogenesis-related protein 1... 0.02 Archaeplastida
Mp7g00440.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.05 Archaeplastida
Pp3c2_30710V3.1 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
Smo101024 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare 0.04 Archaeplastida
Smo101466 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.03 Archaeplastida
Solyc01g106605.1.1 No alias Pathogenesis-related protein 1A1 OS=Solanum lycopersicum... 0.03 Archaeplastida
Solyc07g006710.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e002028_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida
Zm00001e008453_P001 No alias Pathogenesis-related protein 1A1 OS=Solanum lycopersicum... 0.04 Archaeplastida
Zm00001e016073_P001 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
Zm00001e016075_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 Archaeplastida
Zm00001e023732_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 Archaeplastida
Zm00001e033272_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
InterPro domains Description Start Stop
IPR014044 CAP_domain 33 150
No external refs found!