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  5. Smo122441

Smo122441


Description : RNA biosynthesis.transcriptional activation.GRAS transcription factor


Gene families : OG0001710 (Archaeplastida) Phylogenetic Tree(s): OG0001710_tree ,
OG_05_0001098 (LandPlants) Phylogenetic Tree(s): OG_05_0001098_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo122441
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT5G17490 RGL3 RGA-like protein 3 0.02 Archaeplastida
LOC_Os03g49990.1 No alias DELLA-type gibberellin signal transducer. transcription... 0.02 Archaeplastida
Mp5g20660.1 No alias DELLA-type gibberellin signal transducer. transcription... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 102 454
No external refs found!