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  5. Smo125582

Smo125582


Description : Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana


Gene families : OG0008686 (Archaeplastida) Phylogenetic Tree(s): OG0008686_tree ,
OG_05_0103299 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo125582
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Gb_16072 No alias RNA editing factor (OTP82) 0.04 Archaeplastida
Gb_21016 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Gb_35467 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
MA_130999g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
MA_137736g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
MA_820066g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1 24
No external refs found!