AT1G32640 (ATMYC2, MYC2,...)


Aliases : ATMYC2, MYC2, RD22BP1, JIN1, ZBF1, JAI1

Description : Basic helix-loop-helix (bHLH) DNA-binding family protein


Gene families : OG0000688 (Archaeplastida) Phylogenetic Tree(s): OG0000688_tree ,
OG_05_0000488 (LandPlants) Phylogenetic Tree(s): OG_05_0000488_tree ,
OG_06_0001395 (SeedPlants) Phylogenetic Tree(s): OG_06_0001395_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G32640
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013156001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01027162001 No alias Transcription factor bHLH13 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01027412001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_10001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_36294 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os01g50940.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os10g42430.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_5838g0020 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc01g096050.4.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Solyc05g050560.1.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc08g005050.4.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc08g076930.1.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Solyc08g083170.1.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc10g009270.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc10g009290.1.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e020021_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006568 tryptophan metabolic process IMP Interproscan
BP GO:0006568 tryptophan metabolic process IEP Interproscan
BP GO:0006612 protein targeting to membrane RCA Interproscan
BP GO:0009269 response to desiccation IEP Interproscan
BP GO:0009611 response to wounding IEP Interproscan
BP GO:0009611 response to wounding RCA Interproscan
BP GO:0009611 response to wounding TAS Interproscan
BP GO:0009620 response to fungus RCA Interproscan
BP GO:0009694 jasmonic acid metabolic process RCA Interproscan
BP GO:0009695 jasmonic acid biosynthetic process RCA Interproscan
BP GO:0009737 response to abscisic acid IEP Interproscan
BP GO:0009738 abscisic acid-activated signaling pathway RCA Interproscan
BP GO:0009753 response to jasmonic acid IMP Interproscan
BP GO:0009753 response to jasmonic acid RCA Interproscan
BP GO:0009759 indole glucosinolate biosynthetic process IMP Interproscan
BP GO:0009759 indole glucosinolate biosynthetic process IEP Interproscan
BP GO:0009863 salicylic acid mediated signaling pathway RCA Interproscan
BP GO:0009867 jasmonic acid mediated signaling pathway IMP Interproscan
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Interproscan
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP Interproscan
BP GO:0009963 positive regulation of flavonoid biosynthetic process RCA Interproscan
BP GO:0010200 response to chitin IEP Interproscan
BP GO:0010363 regulation of plant-type hypersensitive response RCA Interproscan
BP GO:0043069 negative regulation of programmed cell death RCA Interproscan
BP GO:0043619 regulation of transcription from RNA polymerase II promoter in response to oxidative stress IMP Interproscan
BP GO:0045893 positive regulation of transcription, DNA-templated IDA Interproscan
BP GO:0048364 root development IMP Interproscan
BP GO:0051090 regulation of DNA-binding transcription factor activity IMP Interproscan
BP GO:2000068 regulation of defense response to insect IMP Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening IEP Neighborhood
BP GO:0002213 defense response to insect IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
BP GO:0002679 respiratory burst involved in defense response IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004722 protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005342 organic acid transmembrane transporter activity IEP Neighborhood
MF GO:0005345 purine nucleobase transmembrane transporter activity IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006857 oligopeptide transport IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0006972 hyperosmotic response IEP Neighborhood
BP GO:0007231 osmosensory signaling pathway IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0009612 response to mechanical stimulus IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009692 ethylene metabolic process IEP Neighborhood
BP GO:0009693 ethylene biosynthetic process IEP Neighborhood
BP GO:0009723 response to ethylene IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009873 ethylene-activated signaling pathway IEP Neighborhood
BP GO:0009900 dehiscence IEP Neighborhood
BP GO:0009901 anther dehiscence IEP Neighborhood
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP Neighborhood
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP Neighborhood
BP GO:0010184 cytokinin transport IEP Neighborhood
BP GO:0010232 vascular transport IEP Neighborhood
BP GO:0010233 phloem transport IEP Neighborhood
BP GO:0010286 heat acclimation IEP Neighborhood
MF GO:0015205 nucleobase transmembrane transporter activity IEP Neighborhood
MF GO:0015211 purine nucleoside transmembrane transporter activity IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
MF GO:0016165 linoleate 13S-lipoxygenase activity IEP Neighborhood
MF GO:0016174 NAD(P)H oxidase activity IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016629 12-oxophytodienoate reductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0017077 oxidative phosphorylation uncoupler activity IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
BP GO:0033500 carbohydrate homeostasis IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0035690 cellular response to drug IEP Neighborhood
BP GO:0042538 hyperosmotic salinity response IEP Neighborhood
CC GO:0043230 extracellular organelle IEP Neighborhood
BP GO:0043449 cellular alkene metabolic process IEP Neighborhood
BP GO:0043450 alkene biosynthetic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0045730 respiratory burst IEP Neighborhood
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
CC GO:0070062 extracellular exosome IEP Neighborhood
BP GO:0070297 regulation of phosphorelay signal transduction system IEP Neighborhood
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP Neighborhood
BP GO:0071323 cellular response to chitin IEP Neighborhood
BP GO:0071417 cellular response to organonitrogen compound IEP Neighborhood
BP GO:0071470 cellular response to osmotic stress IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0080086 stamen filament development IEP Neighborhood
MF GO:0090448 glucosinolate:proton symporter activity IEP Neighborhood
BP GO:0090449 phloem glucosinolate loading IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1900055 regulation of leaf senescence IEP Neighborhood
BP GO:1900056 negative regulation of leaf senescence IEP Neighborhood
BP GO:1900673 olefin metabolic process IEP Neighborhood
BP GO:1900674 olefin biosynthetic process IEP Neighborhood
BP GO:1901349 glucosinolate transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1901699 cellular response to nitrogen compound IEP Neighborhood
BP GO:1902532 negative regulation of intracellular signal transduction IEP Neighborhood
CC GO:1903561 extracellular vesicle IEP Neighborhood
BP GO:1905622 negative regulation of leaf development IEP Neighborhood
BP GO:2000024 regulation of leaf development IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 452 497
IPR025610 MYC/MYB_N 68 252
No external refs found!