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  5. Smo13030

Smo13030


Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.large subunit


Gene families : OG0000654 (Archaeplastida) Phylogenetic Tree(s): OG0000654_tree ,
OG_05_0001447 (LandPlants) Phylogenetic Tree(s): OG_05_0001447_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo13030
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
MA_10429502g0010 No alias large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.02 Archaeplastida
Mp6g18430.1 No alias large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 284 343
No external refs found!