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  5. Smo131328

Smo131328


Description : Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase


Gene families : OG0003058 (Archaeplastida) Phylogenetic Tree(s): OG0003058_tree ,
OG_05_0003818 (LandPlants) Phylogenetic Tree(s): OG_05_0003818_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo131328
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00226710 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol... 0.02 Archaeplastida
AT1G03475 ATCPO-I, LIN2, HEMF1 Coproporphyrinogen III oxidase 0.06 Archaeplastida
Cpa|evm.model.tig00000471.12 No alias Coenzyme metabolism.tetrapyrrol... 0.05 Archaeplastida
Cre02.g092600 No alias Coenzyme metabolism.tetrapyrrol... 0.08 Archaeplastida
GSVIVT01015906001 No alias Coenzyme metabolism.tetrapyrrol... 0.04 Archaeplastida
MA_393193g0010 No alias oxygen-dependent coproporphyrinogen III oxidase (HemF) 0.05 Archaeplastida
MA_73740g0010 No alias oxygen-dependent coproporphyrinogen III oxidase (HemF) 0.07 Archaeplastida
Mp3g17410.1 No alias oxygen-dependent coproporphyrinogen III oxidase (HemF) 0.1 Archaeplastida
Pp3c22_5800V3.1 No alias Coproporphyrinogen III oxidase 0.11 Archaeplastida
Solyc10g005110.3.1 No alias oxygen-dependent coproporphyrinogen III oxidase (HemF) 0.05 Archaeplastida
Zm00001e006977_P001 No alias oxygen-dependent coproporphyrinogen III oxidase (HemF) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006553 lysine metabolic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009085 lysine biosynthetic process IEP Neighborhood
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0010242 oxygen evolving activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0046451 diaminopimelate metabolic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001260 Coprogen_oxidase_aer 2 301
No external refs found!