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  5. AMTR_s00013p00099260

AMTR_s00013p00099260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.50

No description available


Gene families : OG0007038 (Archaeplastida) Phylogenetic Tree(s): OG0007038_tree ,
OG_05_0008430 (LandPlants) Phylogenetic Tree(s): OG_05_0008430_tree ,
OG_06_0009567 (SeedPlants) Phylogenetic Tree(s): OG_06_0009567_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00099260
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT5G11620 No alias SWIM zinc finger family protein / mitogen-activated... 0.04 Archaeplastida
LOC_Os06g36030.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g066550.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005231 excitatory extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
CC GO:0030288 outer membrane-bounded periplasmic space IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
CC GO:0042597 periplasmic space IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 150 196
IPR007527 Znf_SWIM 57 83
No external refs found!