Smo133501


Description : Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase


Gene families : OG0000728 (Archaeplastida) Phylogenetic Tree(s): OG0000728_tree ,
OG_05_0034138 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo133501
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT3G14510 No alias Polyprenyl synthetase family protein 0.03 Archaeplastida
AT3G20160 No alias Terpenoid synthases superfamily protein 0.06 Archaeplastida
Gb_21550 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_10429253g0010 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_138828g0010 No alias isoprenyl diphosphate synthase 0.03 Archaeplastida
MA_888237g0010 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 63 291
No external refs found!