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  5. Smo135843

Smo135843


Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.KNOX transcription factor


Gene families : OG0000263 (Archaeplastida) Phylogenetic Tree(s): OG0000263_tree ,
OG_05_0000128 (LandPlants) Phylogenetic Tree(s): OG_05_0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo135843
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT1G23380 KNAT6, KNAT6L, KNAT6S KNOTTED1-like homeobox gene 6 0.02 Archaeplastida
LOC_Os03g03164.2 No alias transcription factor (KNOX) 0.03 Archaeplastida
LOC_Os03g47016.1 No alias transcription factor (KNOX) 0.03 Archaeplastida
LOC_Os07g03770.1 No alias transcription factor (KNOX) 0.04 Archaeplastida
LOC_Os08g19650.1 No alias transcription factor (KNOX) 0.05 Archaeplastida
Smo90744 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
Solyc12g010410.3.1 No alias transcription factor (KNOX) 0.03 Archaeplastida
Zm00001e012293_P001 No alias transcription factor (KNOX) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR005541 KNOX2 65 113
No external refs found!