Smo137774

Description : Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit epsilon

Gene families : OG0004278 (Archaeplastida) Phylogenetic Tree(s): OG0004278_tree ,
OG_05_0003295 (LandPlants) Phylogenetic Tree(s): OG_05_0003295_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo137774
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00184530	evm_27.TU.AmTr_v1...	Photosynthesis.photophosphorylation.ATP synthase...	0.1	Archaeplastida
ATCG00470	ATPE	ATP synthase epsilon chain	0.11	Archaeplastida
Gb_04062	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.13	Archaeplastida
Gb_11358	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.13	Archaeplastida
Gb_25936	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.13	Archaeplastida
LOC_Os01g58000.1	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.25	Archaeplastida
LOC_Os06g02980.1	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.07	Archaeplastida
LOC_Os06g39756.1	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.18	Archaeplastida
LOC_Os10g21264.1	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.03	Archaeplastida
LOC_Os12g19430.1	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.22	Archaeplastida
Solyc00g500140.1.1	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.03	Archaeplastida
Solyc01g017220.2.1	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.02	Archaeplastida
Zm00001e003900_P001	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.18	Archaeplastida
Zm00001e042031_P001	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.18	Archaeplastida
Zm00001e042052_P001	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.18	Archaeplastida
Zm00001e042080_P001	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.18	Archaeplastida
Zm00001e042096_P001	No alias	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.18	Archaeplastida
Zm00001e042162_P001	No alias	No annotation	0.12	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009123	nucleoside monophosphate metabolic process	None	Extended
BP	GO:0009124	nucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009126	purine nucleoside monophosphate metabolic process	None	Extended
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009161	ribonucleoside monophosphate metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	None	Extended
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015672	monovalent inorganic cation transport	None	Extended
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	None	Extended
BP	GO:0015986	ATP synthesis coupled proton transport	IEA	Interproscan
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:0098655	cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1902600	proton transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
CC	GO:0009521	photosystem	IEP	Neighborhood
CC	GO:0009522	photosystem I	IEP	Neighborhood
CC	GO:0009523	photosystem II	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015078	proton transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015977	carbon fixation	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0019684	photosynthesis, light reaction	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
CC	GO:0031360	intrinsic component of thylakoid membrane	IEP	Neighborhood
CC	GO:0031361	integral component of thylakoid membrane	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044436	thylakoid part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
CC	GO:0098796	membrane protein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR020546	ATP_synth_F1_dsu/esu_N	3	82

External Links

No external refs found!

Smo137774

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation