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  4. Sequence
  5. Smo137779

Smo137779


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS2 component


Gene families : OG0002098 (Archaeplastida) Phylogenetic Tree(s): OG0002098_tree ,
OG_05_0001646 (LandPlants) Phylogenetic Tree(s): OG_05_0001646_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo137779
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00108730 evm_27.TU.AmTr_v1... 30S ribosomal protein S2, chloroplastic OS=Amborella trichopoda 0.11 Archaeplastida
ATCG00160 RPS2 ribosomal protein S2 0.19 Archaeplastida
Gb_26286 No alias ATP synthase subunit alpha, chloroplastic OS=Cycas... 0.05 Archaeplastida
LOC_Os02g24612.1 No alias component psRPS2 of small ribosomal subunit proteome 0.15 Archaeplastida
LOC_Os10g21234.1 No alias component psRPS2 of small ribosomal subunit proteome 0.09 Archaeplastida
LOC_Os10g38278.1 No alias component psRPS2 of small ribosomal subunit proteome 0.15 Archaeplastida
Solyc00g500051.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.03 Archaeplastida
Solyc00g500134.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.1 Archaeplastida
Solyc00g500204.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.1 Archaeplastida
Solyc00g500291.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.1 Archaeplastida
Solyc00g500320.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.1 Archaeplastida
Solyc09g018555.1.1 No alias 30S ribosomal protein S2, chloroplastic OS=Nicotiana... 0.07 Archaeplastida
Solyc12g062630.1.1 No alias 30S ribosomal protein S2, chloroplastic OS=Solanum... 0.22 Archaeplastida
Solyc12g062640.2.1 No alias 30S ribosomal protein S2, chloroplastic OS=Solanum... 0.03 Archaeplastida
Zm00001e013128_P001 No alias component psRPS2 of small ribosomal subunit proteome 0.06 Archaeplastida
Zm00001e042073_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e042233_P001 No alias component psRPS2 of small ribosomal subunit proteome 0.07 Archaeplastida
Zm00001e042272_P001 No alias component psRPS2 of small ribosomal subunit proteome 0.04 Archaeplastida
Zm00001e042360_P001 No alias component psRPS2 of small ribosomal subunit proteome 0.07 Archaeplastida
Zm00001e042428_P001 No alias component psRPS2 of small ribosomal subunit proteome 0.07 Archaeplastida
Zm00001e042442_P001 No alias no hits & (original description: none) 0.14 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
CC GO:0031360 intrinsic component of thylakoid membrane IEP Neighborhood
CC GO:0031361 integral component of thylakoid membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 15 226
No external refs found!