- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS19 component
Gene families : OG0002712 (Archaeplastida) Phylogenetic Tree(s): OG0002712_tree ,
OG_05_0002094 (LandPlants) Phylogenetic Tree(s): OG_05_0002094_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo137793 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ATCG00820 | RPS19 | ribosomal protein S19 | 0.07 | Archaeplastida | |
| Cre08.g375250 | No alias | No description available | 0.02 | Archaeplastida | |
| GSVIVT01038017001 | No alias | Protein biosynthesis.organelle translation... | 0.03 | Archaeplastida | |
| LOC_Os04g16772.1 | No alias | 30S ribosomal protein S19, chloroplastic OS=Oryza nivara... | 0.07 | Archaeplastida | |
| LOC_Os04g16818.1 | No alias | 30S ribosomal protein S19, chloroplastic OS=Oryza nivara... | 0.07 | Archaeplastida | |
| LOC_Os07g25024.1 | No alias | 30S ribosomal protein S19, chloroplastic OS=Oryza nivara... | 0.07 | Archaeplastida | |
| LOC_Os08g15266.1 | No alias | 30S ribosomal protein S19, chloroplastic OS=Oryza nivara... | 0.07 | Archaeplastida | |
| LOC_Os09g24412.1 | No alias | 30S ribosomal protein S19, chloroplastic OS=Oryza nivara... | 0.07 | Archaeplastida | |
| LOC_Os10g21352.1 | No alias | 30S ribosomal protein S19, chloroplastic OS=Oryza nivara... | 0.07 | Archaeplastida | |
| Mp4g08530.1 | No alias | component mtRPS19 of small ribosomal subunit proteome | 0.09 | Archaeplastida | |
| Mp5g23450.1 | No alias | component mtRPS19 of small ribosomal subunit proteome | 0.03 | Archaeplastida | |
| Pp3c3_35760V3.1 | No alias | ribosomal protein S19 | 0.05 | Archaeplastida | |
| Solyc00g500273.1.1 | No alias | component mtRPS19 of small ribosomal subunit proteome | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005507 | copper ion binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Neighborhood |
| CC | GO:0009521 | photosystem | IEP | Neighborhood |
| CC | GO:0009523 | photosystem II | IEP | Neighborhood |
| MF | GO:0015002 | heme-copper terminal oxidase activity | IEP | Neighborhood |
| BP | GO:0022900 | electron transport chain | IEP | Neighborhood |
| CC | GO:0031360 | intrinsic component of thylakoid membrane | IEP | Neighborhood |
| CC | GO:0031361 | integral component of thylakoid membrane | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044425 | membrane part | IEP | Neighborhood |
| CC | GO:0044436 | thylakoid part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002222 | Ribosomal_S19 | 10 | 90 |
| No external refs found! |