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  5. Smo137879

Smo137879


Description : Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex.D2 component PsbD


Gene families : OG0004828 (Archaeplastida) Phylogenetic Tree(s): OG0004828_tree ,
OG_05_0003703 (LandPlants) Phylogenetic Tree(s): OG_05_0003703_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo137879
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00106890 evm_27.TU.AmTr_v1... Photosystem II D2 protein OS=Amborella trichopoda 0.12 Archaeplastida
ATCG00270 PSBD photosystem II reaction center protein D 0.13 Archaeplastida
GSVIVT01010924001 No alias Photosystem II D2 protein OS=Vitis vinifera 0.09 Archaeplastida
GSVIVT01029661001 No alias Photosystem II D2 protein OS=Vitis vinifera 0.07 Archaeplastida
Gb_06825 No alias no description available(sp|q85ac9|psbd_antag : 421.0) 0.03 Archaeplastida
Gb_41667 No alias component PsbD/D2 of PS-II reaction center complex.... 0.1 Archaeplastida
LOC_Os02g24634.1 No alias component PsbD/D2 of PS-II reaction center complex 0.12 Archaeplastida
LOC_Os04g16872.1 No alias component PsbD/D2 of PS-II reaction center complex 0.3 Archaeplastida
Solyc00g230080.1.1 No alias Photosystem II D2 protein OS=Tupiella akineta... 0.04 Archaeplastida
Solyc05g021190.2.1 No alias Photosystem II D2 protein OS=Pleurastrum terricola... 0.06 Archaeplastida
Zm00001e015953_P001 No alias component PsbD/D2 of PS-II reaction center complex 0.17 Archaeplastida
Zm00001e042043_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.15 Archaeplastida
Zm00001e042109_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.15 Archaeplastida
Zm00001e042158_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.15 Archaeplastida
Zm00001e042173_P001 No alias Photosystem II D2 protein OS=Angiopteris evecta... 0.15 Archaeplastida
Zm00001e042427_P001 No alias component PsbD/D2 of PS-II reaction center complex 0.17 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0031360 intrinsic component of thylakoid membrane IEP Neighborhood
CC GO:0031361 integral component of thylakoid membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 30 317
No external refs found!