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Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPP2 component
Gene families : OG0001112 (Archaeplastida) Phylogenetic Tree(s): OG0001112_tree ,
OG_05_0001212 (LandPlants) Phylogenetic Tree(s): OG_05_0001212_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo139397 | |
| Cluster | HCCA: Cluster_113 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00071p00177850 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | Archaeplastida | |
| AT2G27710 | No alias | 60S acidic ribosomal protein family | 0.22 | Archaeplastida | |
| AT2G27720 | No alias | 60S acidic ribosomal protein family | 0.24 | Archaeplastida | |
| AT3G44590 | No alias | 60S acidic ribosomal protein family | 0.18 | Archaeplastida | |
| Cpa|evm.model.tig00020830.75 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | Archaeplastida | |
| Cre02.g143050 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.21 | Archaeplastida | |
| GSVIVT01031366001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | Archaeplastida | |
| GSVIVT01033814001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.19 | Archaeplastida | |
| GSVIVT01034757001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | Archaeplastida | |
| LOC_Os01g09510.4 | No alias | component RPP2 of LSU proteome component | 0.11 | Archaeplastida | |
| MA_10431146g0010 | No alias | component RPP2 of LSU proteome component | 0.05 | Archaeplastida | |
| MA_177584g0010 | No alias | component RPP2 of LSU proteome component | 0.16 | Archaeplastida | |
| MA_8598039g0010 | No alias | component RPP2 of LSU proteome component | 0.17 | Archaeplastida | |
| Mp1g06260.1 | No alias | component RPP2 of LSU proteome component | 0.12 | Archaeplastida | |
| Mp1g08160.1 | No alias | component RPP2 of LSU proteome component | 0.06 | Archaeplastida | |
| Mp1g18620.1 | No alias | component RPP2 of LSU proteome component | 0.02 | Archaeplastida | |
| Pp3c10_2900V3.1 | No alias | 60S acidic ribosomal protein family | 0.23 | Archaeplastida | |
| Pp3c14_7080V3.1 | No alias | 60S acidic ribosomal protein family | 0.15 | Archaeplastida | |
| Pp3c1_27060V3.1 | No alias | 60S acidic ribosomal protein family | 0.22 | Archaeplastida | |
| Pp3c2_15480V3.1 | No alias | 60S acidic ribosomal protein family | 0.18 | Archaeplastida | |
| Pp3c6_20310V3.1 | No alias | 60S acidic ribosomal protein family | 0.16 | Archaeplastida | |
| Solyc01g009447.1.1 | No alias | component RPP2 of LSU proteome component | 0.09 | Archaeplastida | |
| Solyc06g074430.4.1 | No alias | component RPP2 of LSU proteome component | 0.03 | Archaeplastida | |
| Solyc11g067100.2.1 | No alias | component RPP2 of LSU proteome component | 0.14 | Archaeplastida | |
| Zm00001e006597_P001 | No alias | component RPP2 of LSU proteome component | 0.08 | Archaeplastida | |
| Zm00001e026591_P001 | No alias | component RPP2 of LSU proteome component | 0.19 | Archaeplastida | |
| Zm00001e026592_P001 | No alias | component RPP2 of LSU proteome component | 0.18 | Archaeplastida | |
| Zm00001e026593_P001 | No alias | component RPP2 of LSU proteome component | 0.19 | Archaeplastida | |
| Zm00001e026594_P001 | No alias | no hits & (original description: none) | 0.11 | Archaeplastida | |
| Zm00001e041900_P001 | No alias | component RPP2 of LSU proteome component | 0.19 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Neighborhood |
| BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
| BP | GO:0007018 | microtubule-based movement | IEP | Neighborhood |
| BP | GO:0008033 | tRNA processing | IEP | Neighborhood |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Neighborhood |
| CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
| CC | GO:0034998 | oligosaccharyltransferase I complex | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| CC | GO:1990234 | transferase complex | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |