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  4. Sequence
  5. Smo140200

Smo140200


Description : Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type 1,4-beta-glucan synthase


Gene families : OG0000194 (Archaeplastida) Phylogenetic Tree(s): OG0000194_tree ,
OG_05_0000643 (LandPlants) Phylogenetic Tree(s): OG_05_0000643_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo140200
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00171550 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.03 Archaeplastida
AMTR_s00065p00054150 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.03 Archaeplastida
AT1G23480 ATCSLA3, CSLA03,... cellulose synthase-like A3 0.02 Archaeplastida
AT2G24630 ATCSLC8, ATCSLC08, CSLC08 Glycosyl transferase family 2 protein 0.04 Archaeplastida
AT3G56000 ATCSLA14, CSLA14 cellulose synthase like A14 0.02 Archaeplastida
AT4G16590 ATCSLA1, ATCSLA01, CSLA01 cellulose synthase-like A01 0.02 Archaeplastida
GSVIVT01002010001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.02 Archaeplastida
GSVIVT01009290001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.03 Archaeplastida
GSVIVT01016135001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.04 Archaeplastida
GSVIVT01031405001 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.03 Archaeplastida
GSVIVT01032523001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.03 Archaeplastida
GSVIVT01033168001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.04 Archaeplastida
Gb_05418 No alias 1,4-beta-glucan synthase (CSLC) 0.05 Archaeplastida
Gb_21966 No alias mannan synthase (CSLA) 0.03 Archaeplastida
Gb_24488 No alias 1,4-beta-glucan synthase (CSLC) 0.05 Archaeplastida
Gb_27616 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.03 Archaeplastida
Gb_28041 No alias Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os02g09930.1 No alias mannan synthase (CSLA) 0.02 Archaeplastida
LOC_Os03g56060.1 No alias 1,4-beta-glucan synthase (CSLC) 0.02 Archaeplastida
LOC_Os05g43530.1 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
LOC_Os07g43710.1 No alias mannan synthase (CSLA) 0.03 Archaeplastida
MA_10426467g0020 No alias Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis... 0.03 Archaeplastida
MA_10429365g0010 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
MA_449559g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9381137g0010 No alias Probable xyloglucan glycosyltransferase 2 OS=Oryza... 0.02 Archaeplastida
MA_96942g0010 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Mp1g22770.1 No alias mannan synthase (CSLA) 0.03 Archaeplastida
Pp3c14_13750V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.05 Archaeplastida
Pp3c17_19630V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.04 Archaeplastida
Pp3c17_19670V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.05 Archaeplastida
Pp3c22_1440V3.1 No alias Cellulose-synthase-like C5 0.03 Archaeplastida
Smo442658 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.04 Archaeplastida
Solyc04g077470.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
Solyc06g074630.4.1 No alias mannan synthase (CSLA) 0.03 Archaeplastida
Solyc08g006310.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.02 Archaeplastida
Solyc09g057640.4.1 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
Solyc10g083670.3.1 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Solyc11g066820.2.1 No alias mannan synthase (CSLA) 0.03 Archaeplastida
Zm00001e015809_P002 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Zm00001e019706_P002 No alias 1,4-beta-glucan synthase (CSLC) 0.02 Archaeplastida
Zm00001e025054_P003 No alias mannan synthase (CSLA) 0.04 Archaeplastida
Zm00001e028988_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!