AMTR_s00013p00186300 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.116

Description : Cell cycle.mitosis and meiosis.meiotic recombination.meiotic initiation.ASY1 homolog pairing factor


Gene families : OG0005089 (Archaeplastida) Phylogenetic Tree(s): OG0005089_tree ,
OG_05_0005136 (LandPlants) Phylogenetic Tree(s): OG_05_0005136_tree ,
OG_06_0004112 (SeedPlants) Phylogenetic Tree(s): OG_06_0004112_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00186300
Cluster HCCA: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010478001 No alias Meiosis-specific protein ASY1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01010479001 No alias Cell cycle.mitosis and meiosis.meiotic... 0.03 Archaeplastida
LOC_Os01g07170.1 No alias Meiosis-specific protein PAIR2 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Mp7g11830.1 No alias ASY1 meiotic recombination homolog pairing factor 0.02 Archaeplastida
Pp3c5_4780V3.1 No alias DNA-binding HORMA family protein 0.01 Archaeplastida
Zm00001e010122_P005 No alias ASY1 meiotic recombination homolog pairing factor 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003511 HORMA_dom 28 231
No external refs found!