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  5. Smo143891

Smo143891


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL18 component


Gene families : OG0002601 (Archaeplastida) Phylogenetic Tree(s): OG0002601_tree ,
OG_05_0005445 (LandPlants) Phylogenetic Tree(s): OG_05_0005445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo143891
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00209880 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.04 Archaeplastida
AT1G48350 No alias Ribosomal L18p/L5e family protein 0.03 Archaeplastida
Cre01.g052100 No alias Protein biosynthesis.organelle translation... 0.05 Archaeplastida
GSVIVT01017720001 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Gb_12756 No alias component psRPL18 of large ribosomal subunit proteome 0.04 Archaeplastida
LOC_Os03g61260.1 No alias component psRPL18 of large ribosomal subunit proteome 0.03 Archaeplastida
MA_7609850g0010 No alias 50S ribosomal protein L18, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
Mp6g08500.1 No alias component psRPL18 of large ribosomal subunit proteome 0.03 Archaeplastida
Pp3c11_5070V3.1 No alias Ribosomal L18p/L5e family protein 0.05 Archaeplastida
Pp3c7_24650V3.1 No alias Ribosomal L18p/L5e family protein 0.03 Archaeplastida
Solyc12g098890.2.1 No alias component psRPL18 of large ribosomal subunit proteome 0.04 Archaeplastida
Zm00001e006246_P001 No alias component psRPL18 of large ribosomal subunit proteome 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 2 112
No external refs found!