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Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS23 component
Gene families : OG0001653 (Archaeplastida) Phylogenetic Tree(s): OG0001653_tree ,
OG_05_0002025 (LandPlants) Phylogenetic Tree(s): OG_05_0002025_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo145246 | |
| Cluster | HCCA: Cluster_90 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00058p00204160 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | Archaeplastida | |
| AT5G02960 | No alias | Ribosomal protein S12/S23 family protein | 0.14 | Archaeplastida | |
| Cpa|evm.model.tig00001264.27 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | Archaeplastida | |
| Cre12.g504200 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.14 | Archaeplastida | |
| GSVIVT01016341001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | Archaeplastida | |
| GSVIVT01025120001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | Archaeplastida | |
| GSVIVT01025626001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | Archaeplastida | |
| Gb_02361 | No alias | component RPS23 of SSU proteome | 0.07 | Archaeplastida | |
| Gb_36570 | No alias | component RPS23 of SSU proteome | 0.11 | Archaeplastida | |
| LOC_Os01g61814.1 | No alias | component RPS23 of SSU proteome | 0.12 | Archaeplastida | |
| LOC_Os03g60400.1 | No alias | component RPS23 of SSU proteome | 0.08 | Archaeplastida | |
| MA_10436470g0020 | No alias | component RPS23 of SSU proteome | 0.11 | Archaeplastida | |
| MA_19871g0020 | No alias | component RPS23 of SSU proteome | 0.03 | Archaeplastida | |
| MA_9043057g0010 | No alias | component RPS23 of SSU proteome | 0.03 | Archaeplastida | |
| Mp2g08680.1 | No alias | component RPS23 of SSU proteome | 0.13 | Archaeplastida | |
| Pp3c11_11070V3.1 | No alias | Ribosomal protein S12/S23 family protein | 0.08 | Archaeplastida | |
| Pp3c12_25120V3.1 | No alias | Ribosomal protein S12/S23 family protein | 0.08 | Archaeplastida | |
| Pp3c2_24130V3.1 | No alias | Ribosomal protein S12/S23 family protein | 0.14 | Archaeplastida | |
| Pp3c4_3120V3.1 | No alias | Ribosomal protein S12/S23 family protein | 0.09 | Archaeplastida | |
| Pp3c7_14200V3.1 | No alias | Ribosomal protein S12/S23 family protein | 0.1 | Archaeplastida | |
| Solyc06g005110.3.1 | No alias | 40S ribosomal protein S23 OS=Fragaria ananassa... | 0.02 | Archaeplastida | |
| Solyc09g007350.3.1 | No alias | component RPS23 of SSU proteome | 0.13 | Archaeplastida | |
| Solyc10g084310.2.1 | No alias | component RPS23 of SSU proteome | 0.08 | Archaeplastida | |
| Solyc10g086020.3.1 | No alias | component RPS23 of SSU proteome | 0.12 | Archaeplastida | |
| Zm00001e006170_P001 | No alias | component RPS23 of SSU proteome | 0.1 | Archaeplastida | |
| Zm00001e011770_P001 | No alias | component RPS23 of SSU proteome | 0.05 | Archaeplastida | |
| Zm00001e019377_P001 | No alias | component RPS23 of SSU proteome | 0.12 | Archaeplastida | |
| Zm00001e027265_P001 | No alias | component RPS23 of SSU proteome | 0.09 | Archaeplastida | |
| Zm00001e031855_P001 | No alias | component RPS23 of SSU proteome | 0.01 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| BP | GO:0006284 | base-excision repair | IEP | Neighborhood |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Neighborhood |
| MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| CC | GO:0009507 | chloroplast | IEP | Neighborhood |
| CC | GO:0009536 | plastid | IEP | Neighborhood |
| MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Neighborhood |
| MF | GO:0019207 | kinase regulator activity | IEP | Neighborhood |
| MF | GO:0019887 | protein kinase regulator activity | IEP | Neighborhood |
| MF | GO:0030234 | enzyme regulator activity | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| CC | GO:0034998 | oligosaccharyltransferase I complex | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0098772 | molecular function regulator | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| CC | GO:1990234 | transferase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006032 | Ribosomal_S12/S23 | 30 | 141 |
| No external refs found! |