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  5. Smo148635

Smo148635


Description : RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP11/MURE component


Gene families : OG0007095 (Archaeplastida) Phylogenetic Tree(s): OG0007095_tree ,
OG_05_0007962 (LandPlants) Phylogenetic Tree(s): OG_05_0007962_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo148635
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00236210 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 Archaeplastida
AT1G63680 MURE, PDE316, ATMURE acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases 0.02 Archaeplastida
MA_961480g0010 No alias PAP11/MURE cofactor of plastid-encoded RNA polymerase 0.02 Archaeplastida
Zm00001e037912_P001 No alias PAP11/MURE cofactor of plastid-encoded RNA polymerase 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004371 glycerone kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000713 Mur_ligase_N 25 99
No external refs found!