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  5. Smo148775

Smo148775


Description : Solute transport.carrier-mediated transport.IT superfamily.putative silicon efflux transporter (LSI2-type)


Gene families : OG0001845 (Archaeplastida) Phylogenetic Tree(s): OG0001845_tree ,
OG_05_0001690 (LandPlants) Phylogenetic Tree(s): OG_05_0001690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo148775
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00168p00064780 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00168p00065430 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.02 Archaeplastida
GSVIVT01028896001 No alias Solute transport.carrier-mediated transport.IT... 0.03 Archaeplastida
LOC_Os02g57620.1 No alias putative silicon efflux transporter (LSI2) 0.03 Archaeplastida
LOC_Os03g01700.1 No alias putative silicon efflux transporter (LSI2) 0.04 Archaeplastida
LOC_Os03g05390.6 No alias putative silicon efflux transporter (LSI2) 0.02 Archaeplastida
LOC_Os10g39980.1 No alias putative silicon efflux transporter (LSI2) 0.03 Archaeplastida
Pp3c12_25580V3.1 No alias Divalent ion symporter 0.02 Archaeplastida
Smo98013 No alias Solute transport.carrier-mediated transport.IT... 0.05 Archaeplastida
Zm00001e000055_P001 No alias putative silicon efflux transporter (LSI2) 0.04 Archaeplastida
Zm00001e002282_P001 No alias putative silicon efflux transporter (LSI2) 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 24 446
No external refs found!