Smo148837

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000448 (LandPlants) Phylogenetic Tree(s): OG_05_0000448_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo148837
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00254310	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AMTR_s00018p00193820	evm_27.TU.AmTr_v1...	ABC transporter B family member 1 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00055p00102180	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.07	Archaeplastida
AT1G02530	PGP12	P-glycoprotein 12	0.03	Archaeplastida
AT1G27940	PGP13	P-glycoprotein 13	0.04	Archaeplastida
AT1G28010	ABCB14, ATABCB14, PGP14	P-glycoprotein 14	0.04	Archaeplastida
AT2G47000	ATPGP4, PGP4, ABCB4, MDR4	ATP binding cassette subfamily B4	0.03	Archaeplastida
AT3G28345	No alias	ABC transporter family protein	0.02	Archaeplastida
AT3G28360	PGP16	P-glycoprotein 16	0.04	Archaeplastida
AT3G28380	PGP17	P-glycoprotein 17	0.03	Archaeplastida
AT4G18050	PGP9	P-glycoprotein 9	0.02	Archaeplastida
AT4G25960	PGP2	P-glycoprotein 2	0.05	Archaeplastida
LOC_Os01g18670.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os02g46680.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
LOC_Os05g47500.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
MA_126766g0010	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Mp1g26440.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Mp7g04390.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Pp3c1_34680V3.1	No alias	P-glycoprotein 10	0.03	Archaeplastida
Pp3c6_7260V3.1	No alias	ATP binding cassette subfamily B19	0.03	Archaeplastida
Pp3c9_13390V3.1	No alias	P-glycoprotein 6	0.03	Archaeplastida
Smo408755	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Solyc03g005860.4.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Solyc06g009280.1.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Solyc11g067300.2.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Solyc11g067310.3.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e017444_P002	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e023274_P001	No alias	subfamily ABCB transporter	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Neighborhood
MF	GO:0051015	actin filament binding	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	349	497

External Links

No external refs found!

Smo148837

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation