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Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo150748 | |
| Cluster | HCCA: Cluster_120 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G33760 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | Archaeplastida | |
| Cre01.g025950 | No alias | Pentatricopeptide repeat-containing protein At5g02860... | 0.01 | Archaeplastida | |
| GSVIVT01033190001 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.02 | Archaeplastida | |
| LOC_Os07g31000.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Smo115259 | No alias | Pentatricopeptide repeat-containing protein At3g24000,... | 0.01 | Archaeplastida | |
| Solyc03g116840.3.1 | No alias | RNA editing factor (OTP81) | 0.01 | Archaeplastida | |
| Solyc04g005460.1.1 | No alias | Pentatricopeptide repeat-containing protein At2g20540... | 0.01 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0042802 | identical protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004000 | adenosine deaminase activity | IEP | Neighborhood |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Neighborhood |
| MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Neighborhood |
| MF | GO:0009916 | alternative oxidase activity | IEP | Neighborhood |
| MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Neighborhood |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Neighborhood |
| MF | GO:0019239 | deaminase activity | IEP | Neighborhood |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 341 | 388 |
| No external refs found! |