1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo151097

Smo151097


Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP1-group protein


Gene families : OG0000372 (Archaeplastida) Phylogenetic Tree(s): OG0000372_tree ,
OG_05_0000804 (LandPlants) Phylogenetic Tree(s): OG_05_0000804_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo151097
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00050990 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida
AT3G52400 SYP122, ATSYP122 syntaxin of plants 122 0.02 Archaeplastida
Cre13.g588550 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
GSVIVT01006716001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
LOC_Os03g57310.1 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
MA_28961g0010 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
Pp3c18_17330V3.1 No alias syntaxin of plants 124 0.02 Archaeplastida
Pp3c24_8580V3.1 No alias syntaxin of plants 124 0.03 Archaeplastida
Solyc01g006950.3.1 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
Solyc07g052470.3.1 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 43 246
No external refs found!