1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo153292

Smo153292


Description : Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component


Gene families : OG0000861 (Archaeplastida) Phylogenetic Tree(s): OG0000861_tree ,
OG_05_0006224 (LandPlants) Phylogenetic Tree(s): OG_05_0006224_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo153292
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00194810 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.06 Archaeplastida
AMTR_s00045p00207040 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
AMTR_s00164p00068000 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.06 Archaeplastida
Cpa|evm.model.tig00020952.49 No alias Protein degradation.peptidase families.serine-type... 0.01 Archaeplastida
Cre03.g204350 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
Cre14.g619100 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
GSVIVT01031146001 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
GSVIVT01037850001 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
Gb_12676 No alias non-proteolytic core component ClpR of chloroplast... 0.03 Archaeplastida
Gb_40312 No alias non-proteolytic core component ClpR of chloroplast... 0.04 Archaeplastida
LOC_Os03g22430.1 No alias non-proteolytic core component ClpR of chloroplast... 0.05 Archaeplastida
LOC_Os05g51450.1 No alias non-proteolytic core component ClpR of chloroplast... 0.03 Archaeplastida
MA_10429819g0020 No alias non-proteolytic core component ClpR of chloroplast... 0.02 Archaeplastida
Mp6g21300.1 No alias non-proteolytic core component ClpR of chloroplast... 0.02 Archaeplastida
Mp7g03170.1 No alias non-proteolytic core component ClpR of chloroplast... 0.02 Archaeplastida
Pp3c16_17780V3.1 No alias CLP protease proteolytic subunit 1 0.03 Archaeplastida
Pp3c26_8310V3.1 No alias CLP protease R subunit 4 0.02 Archaeplastida
Pp3c3_12000V3.1 No alias ATP-dependent caseinolytic (Clp) protease/crotonase... 0.03 Archaeplastida
Solyc01g099690.3.1 No alias non-proteolytic core component ClpR of chloroplast... 0.04 Archaeplastida
Solyc08g077890.3.1 No alias non-proteolytic core component ClpR of chloroplast... 0.03 Archaeplastida
Solyc10g049710.2.1 No alias non-proteolytic core component ClpR of chloroplast... 0.02 Archaeplastida
Zm00001e001632_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e017288_P001 No alias non-proteolytic core component ClpR of chloroplast... 0.03 Archaeplastida
Zm00001e032571_P001 No alias non-proteolytic core component ClpR of chloroplast... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 25 204
No external refs found!