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Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo154356 | |
| Cluster | HCCA: Cluster_40 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00239700 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
| AMTR_s00007p00101250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
| AMTR_s00040p00188020 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
| AMTR_s00129p00073090 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
| AT3G10710 | RHS12 | root hair specific 12 | 0.02 | Archaeplastida | |
| AT4G02320 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
| GSVIVT01031164001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
| Gb_18512 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Gb_24564 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| LOC_Os01g21034.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| LOC_Os02g54190.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| LOC_Os08g34910.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| LOC_Os09g26360.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| MA_10372207g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| MA_26888g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_86577g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Pp3c18_170V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
| Pp3c21_11740V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
| Pp3c8_3840V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
| Smo114014 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
| Solyc01g066360.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Solyc01g091050.4.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Solyc02g014300.2.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Solyc02g081990.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Solyc03g083870.4.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Solyc05g054360.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Solyc06g009180.3.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Solyc07g017560.4.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Zm00001e017514_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Zm00001e017515_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Zm00001e026790_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004857 | enzyme inhibitor activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004650 | polygalacturonase activity | IEP | Neighborhood |
| MF | GO:0008289 | lipid binding | IEP | Neighborhood |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | Neighborhood |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Neighborhood |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
| MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
| MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| BP | GO:0022900 | electron transport chain | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006501 | Pectinesterase_inhib_dom | 3 | 89 |
| No external refs found! |