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  5. Smo158694

Smo158694


Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT5 epsilon subunit


Gene families : OG0004710 (Archaeplastida) Phylogenetic Tree(s): OG0004710_tree ,
OG_05_0005028 (LandPlants) Phylogenetic Tree(s): OG_05_0005028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo158694
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00173980 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.09 Archaeplastida
AT1G24510 No alias TCP-1/cpn60 chaperonin family protein 0.05 Archaeplastida
Cpa|evm.model.tig00000571.47 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 Archaeplastida
Cre03.g156750 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 Archaeplastida
GSVIVT01000590001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 Archaeplastida
GSVIVT01020856001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 Archaeplastida
Gb_12826 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.03 Archaeplastida
Gb_40545 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.04 Archaeplastida
LOC_Os06g36700.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.08 Archaeplastida
MA_10435597g0010 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.04 Archaeplastida
Mp7g17510.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.05 Archaeplastida
Pp3c20_23570V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.05 Archaeplastida
Solyc05g013990.3.1 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.05 Archaeplastida
Zm00001e011557_P001 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.06 Archaeplastida
Zm00001e032727_P001 No alias CCT5 subunit epsilon of CCT chaperonin folding complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004055 argininosuccinate synthase activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 40 531
No external refs found!