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  5. Smo162003

Smo162003


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ ubiquitin-fold protein


Gene families : OG0000077 (Archaeplastida) Phylogenetic Tree(s): OG0000077_tree ,
OG_05_0000511 (LandPlants) Phylogenetic Tree(s): OG_05_0000511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo162003
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT4G05320 UBQ10 polyubiquitin 10 0.02 Archaeplastida
Cpa|evm.model.tig00022075.50 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 Archaeplastida
MA_7609762g0010 No alias No annotation 0.03 Archaeplastida
Mp7g14690.1 No alias component RPS27a of SSU proteome 0.03 Archaeplastida
Solyc11g005635.1.1 No alias Ubiquitin-40S ribosomal protein S27a-3 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e030436_P001 No alias ubiquitin-fold protein (UBQ). ubiquitin-fold protein (RUB) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 79 150
No external refs found!