AT1G32790 (CID11)

Aliases : CID11

Description : CTC-interacting domain 11

Gene families : OG0000719 (Archaeplastida) Phylogenetic Tree(s): OG0000719_tree ,
OG_05_0047870 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0042710 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G32790
Cluster	HCCA: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method	Actions
Gb_33869	No alias	Polyadenylate-binding protein-interacting protein 11...	0.04	Archaeplastida
LOC_Os08g02330.1	No alias	Polyadenylate-binding protein-interacting protein 11...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009072	aromatic amino acid family metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0042537	benzene-containing compound metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046482	para-aminobenzoic acid metabolic process	RCA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000719	photoreactive repair	IEP	Neighborhood
BP	GO:0001933	negative regulation of protein phosphorylation	IEP	Neighborhood
BP	GO:0002238	response to molecule of fungal origin	IEP	Neighborhood
BP	GO:0002532	production of molecular mediator involved in inflammatory response	IEP	Neighborhood
BP	GO:0002538	arachidonic acid metabolite production involved in inflammatory response	IEP	Neighborhood
BP	GO:0002540	leukotriene production involved in inflammatory response	IEP	Neighborhood
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	Neighborhood
MF	GO:0004602	glutathione peroxidase activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0005217	intracellular ligand-gated ion channel activity	IEP	Neighborhood
MF	GO:0005221	intracellular cyclic nucleotide activated cation channel activity	IEP	Neighborhood
MF	GO:0005223	intracellular cGMP-activated cation channel activity	IEP	Neighborhood
MF	GO:0005242	inward rectifier potassium channel activity	IEP	Neighborhood
MF	GO:0005244	voltage-gated ion channel activity	IEP	Neighborhood
MF	GO:0005249	voltage-gated potassium channel activity	IEP	Neighborhood
MF	GO:0005261	cation channel activity	IEP	Neighborhood
MF	GO:0005267	potassium channel activity	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
BP	GO:0006152	purine nucleoside catabolic process	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006290	pyrimidine dimer repair	IEP	Neighborhood
BP	GO:0006301	postreplication repair	IEP	Neighborhood
BP	GO:0006469	negative regulation of protein kinase activity	IEP	Neighborhood
BP	GO:0006470	protein dephosphorylation	IEP	Neighborhood
BP	GO:0006486	protein glycosylation	IEP	Neighborhood
BP	GO:0006487	protein N-linked glycosylation	IEP	Neighborhood
BP	GO:0006690	icosanoid metabolic process	IEP	Neighborhood
BP	GO:0006691	leukotriene metabolic process	IEP	Neighborhood
BP	GO:0006788	heme oxidation	IEP	Neighborhood
BP	GO:0006813	potassium ion transport	IEP	Neighborhood
BP	GO:0006816	calcium ion transport	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
BP	GO:0007602	phototransduction	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
BP	GO:0009164	nucleoside catabolic process	IEP	Neighborhood
BP	GO:0009292	genetic transfer	IEP	Neighborhood
BP	GO:0009294	DNA mediated transformation	IEP	Neighborhood
BP	GO:0009411	response to UV	IEP	Neighborhood
BP	GO:0009581	detection of external stimulus	IEP	Neighborhood
BP	GO:0009582	detection of abiotic stimulus	IEP	Neighborhood
BP	GO:0009583	detection of light stimulus	IEP	Neighborhood
BP	GO:0009585	red, far-red light phototransduction	IEP	Neighborhood
BP	GO:0009820	alkaloid metabolic process	IEP	Neighborhood
BP	GO:0009821	alkaloid biosynthetic process	IEP	Neighborhood
BP	GO:0010019	chloroplast-nucleus signaling pathway	IEP	Neighborhood
BP	GO:0010024	phytochromobilin biosynthetic process	IEP	Neighborhood
BP	GO:0010225	response to UV-C	IEP	Neighborhood
BP	GO:0010563	negative regulation of phosphorus metabolic process	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
MF	GO:0016791	phosphatase activity	IEP	Neighborhood
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Neighborhood
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
MF	GO:0019239	deaminase activity	IEP	Neighborhood
BP	GO:0019370	leukotriene biosynthetic process	IEP	Neighborhood
MF	GO:0019788	NEDD8 transferase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022832	voltage-gated channel activity	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
MF	GO:0022836	gated channel activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
MF	GO:0022839	ion gated channel activity	IEP	Neighborhood
MF	GO:0022843	voltage-gated cation channel activity	IEP	Neighborhood
MF	GO:0030551	cyclic nucleotide binding	IEP	Neighborhood
BP	GO:0033673	negative regulation of kinase activity	IEP	Neighborhood
BP	GO:0034644	cellular response to UV	IEP	Neighborhood
BP	GO:0034656	nucleobase-containing small molecule catabolic process	IEP	Neighborhood
BP	GO:0035335	peptidyl-tyrosine dephosphorylation	IEP	Neighborhood
BP	GO:0042168	heme metabolic process	IEP	Neighborhood
BP	GO:0042278	purine nucleoside metabolic process	IEP	Neighborhood
BP	GO:0042326	negative regulation of phosphorylation	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0043405	regulation of MAP kinase activity	IEP	Neighborhood
BP	GO:0043407	negative regulation of MAP kinase activity	IEP	Neighborhood
BP	GO:0043408	regulation of MAPK cascade	IEP	Neighborhood
BP	GO:0043409	negative regulation of MAPK cascade	IEP	Neighborhood
BP	GO:0043413	macromolecule glycosylation	IEP	Neighborhood
BP	GO:0043549	regulation of kinase activity	IEP	Neighborhood
MF	GO:0043855	cyclic nucleotide-gated ion channel activity	IEP	Neighborhood
BP	GO:0044764	multi-organism cellular process	IEP	Neighborhood
BP	GO:0045859	regulation of protein kinase activity	IEP	Neighborhood
BP	GO:0045936	negative regulation of phosphate metabolic process	IEP	Neighborhood
BP	GO:0046456	icosanoid biosynthetic process	IEP	Neighborhood
BP	GO:0046839	phospholipid dephosphorylation	IEP	Neighborhood
BP	GO:0046856	phosphatidylinositol dephosphorylation	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0047974	guanosine deaminase activity	IEP	Neighborhood
BP	GO:0048193	Golgi vesicle transport	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
BP	GO:0048767	root hair elongation	IEP	Neighborhood
BP	GO:0051202	phytochromobilin metabolic process	IEP	Neighborhood
BP	GO:0051348	negative regulation of transferase activity	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
MF	GO:0052866	phosphatidylinositol phosphate phosphatase activity	IEP	Neighborhood
BP	GO:0070085	glycosylation	IEP	Neighborhood
MF	GO:0070300	phosphatidic acid binding	IEP	Neighborhood
BP	GO:0070838	divalent metal ion transport	IEP	Neighborhood
BP	GO:0071494	cellular response to UV-C	IEP	Neighborhood
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Neighborhood
BP	GO:0071901	negative regulation of protein serine/threonine kinase activity	IEP	Neighborhood
CC	GO:0071944	cell periphery	IEP	Neighborhood
BP	GO:0072511	divalent inorganic cation transport	IEP	Neighborhood
BP	GO:0072523	purine-containing compound catabolic process	IEP	Neighborhood
MF	GO:0099094	ligand-gated cation channel activity	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood
BP	GO:1901568	fatty acid derivative metabolic process	IEP	Neighborhood
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	Neighborhood
BP	GO:1901658	glycosyl compound catabolic process	IEP	Neighborhood
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Neighborhood
BP	GO:1902532	negative regulation of intracellular signal transduction	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR009818	Ataxin-2_C	89	104
IPR000504	RRM_dom	272	339
IPR000504	RRM_dom	175	237

External Links

No external refs found!

AT1G32790 (CID11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation