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  5. Smo165728

Smo165728


Description : Protein PAT1 homolog OS=Arabidopsis thaliana


Gene families : OG0002447 (Archaeplastida) Phylogenetic Tree(s): OG0002447_tree ,
OG_05_0002022 (LandPlants) Phylogenetic Tree(s): OG_05_0002022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo165728
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT1G79090 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.02 Archaeplastida
Cre06.g278203 No alias No description available 0.02 Archaeplastida
Gb_01548 No alias mRNA decay factor (PAT1) 0.02 Archaeplastida
LOC_Os01g56300.1 No alias mRNA decay factor (PAT1) 0.03 Archaeplastida
LOC_Os02g19330.2 No alias mRNA decay factor (PAT1) 0.02 Archaeplastida
Mp4g14040.1 No alias mRNA decay factor (PAT1) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!