Smo166773

Description : Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana

Gene families : OG0000346 (Archaeplastida) Phylogenetic Tree(s): OG0000346_tree ,
OG_05_0008809 (LandPlants) Phylogenetic Tree(s): OG_05_0008809_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo166773
Cluster	HCCA: Cluster_100

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00260320	evm_27.TU.AmTr_v1...	Probable inactive ATP-dependent zinc metalloprotease...	0.04	Archaeplastida
AMTR_s00021p00235220	evm_27.TU.AmTr_v1...	Probable inactive ATP-dependent zinc metalloprotease...	0.03	Archaeplastida
AMTR_s00056p00047160	evm_27.TU.AmTr_v1...	Probable inactive ATP-dependent zinc metalloprotease...	0.06	Archaeplastida
AMTR_s00106p00108310	evm_27.TU.AmTr_v1...	Protein degradation.peptidase families.metallopeptidase...	0.02	Archaeplastida
AT1G50250	FTSH1	FTSH protease 1	0.02	Archaeplastida
AT3G02450	No alias	cell division protein ftsH, putative	0.06	Archaeplastida
AT3G16290	EMB2083	AAA-type ATPase family protein	0.02	Archaeplastida
AT4G23940	No alias	FtsH extracellular protease family	0.07	Archaeplastida
AT5G42270	FTSH5, VAR1	FtsH extracellular protease family	0.04	Archaeplastida
Cpa\|evm.model.tig00021127.121	No alias	ATP-dependent zinc metalloprotease FTSH 5, chloroplastic...	0.02	Archaeplastida
Cre03.g201100	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.04	Archaeplastida
Cre07.g352350	No alias	ATP-dependent zinc metalloprotease FTSH, chloroplastic...	0.04	Archaeplastida
Cre09.g393950	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.01	Archaeplastida
Cre17.g720050	No alias	Protein degradation.peptidase families.metallopeptidase...	0.01	Archaeplastida
GSVIVT01017029001	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.05	Archaeplastida
GSVIVT01019239001	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.04	Archaeplastida
GSVIVT01036484001	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.03	Archaeplastida
Gb_28961	No alias	component FtsHi of protein translocation ATPase motor complex	0.02	Archaeplastida
Gb_32360	No alias	component FtsHi of protein translocation ATPase motor complex	0.05	Archaeplastida
LOC_Os04g39190.1	No alias	component FtsHi of protein translocation ATPase motor complex	0.03	Archaeplastida
MA_10435856g0010	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.07	Archaeplastida
MA_188257g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_98203g0010	No alias	No annotation	0.02	Archaeplastida
Mp6g01370.1	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.05	Archaeplastida
Mp6g15080.1	No alias	component FtsHi of protein translocation ATPase motor complex	0.05	Archaeplastida
Pp3c17_20370V3.1	No alias	AAA-type ATPase family protein	0.05	Archaeplastida
Pp3c20_15780V3.1	No alias	FtsH extracellular protease family	0.02	Archaeplastida
Pp3c22_8480V3.1	No alias	FtsH extracellular protease family	0.02	Archaeplastida
Pp3c23_14665V3.1	No alias	FtsH extracellular protease family	0.03	Archaeplastida
Solyc03g046340.3.1	No alias	component FtsHi of protein translocation ATPase motor complex	0.06	Archaeplastida
Solyc08g082530.4.1	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.1	Archaeplastida
Solyc12g044400.3.1	No alias	component FtsHi of protein translocation ATPase motor complex	0.03	Archaeplastida
Zm00001e007868_P001	No alias	component FtsHi of protein translocation ATPase motor complex	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003678	DNA helicase activity	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003747	translation release factor activity	IEP	Neighborhood
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Neighborhood
MF	GO:0004345	glucose-6-phosphate dehydrogenase activity	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006399	tRNA metabolic process	IEP	Neighborhood
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
MF	GO:0008079	translation termination factor activity	IEP	Neighborhood
MF	GO:0008173	RNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008565	protein transporter activity	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
CC	GO:0032039	integrator complex	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0032977	membrane insertase activity	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0034660	ncRNA metabolic process	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

Smo166773

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation