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Description : RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP2/TAC2 component
Gene families : OG0008584 (Archaeplastida) Phylogenetic Tree(s): OG0008584_tree ,
OG_05_0007907 (LandPlants) Phylogenetic Tree(s): OG_05_0007907_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo167316 | |
| Cluster | HCCA: Cluster_140 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00097240 | evm_27.TU.AmTr_v1... | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.03 | Archaeplastida | |
| Pp3c11_11830V3.1 | No alias | plastid transcriptionally active 2 | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003747 | translation release factor activity | IEP | Neighborhood |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0005991 | trehalose metabolic process | IEP | Neighborhood |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Neighborhood |
| MF | GO:0008079 | translation termination factor activity | IEP | Neighborhood |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Neighborhood |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0009975 | cyclase activity | IEP | Neighborhood |
| MF | GO:0009976 | tocopherol cyclase activity | IEP | Neighborhood |
| MF | GO:0015930 | glutamate synthase activity | IEP | Neighborhood |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Neighborhood |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Neighborhood |
| MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0051213 | dioxygenase activity | IEP | Neighborhood |
| MF | GO:0051287 | NAD binding | IEP | Neighborhood |
| MF | GO:0070403 | NAD+ binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 104 | 163 |
| No external refs found! |