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  5. AMTR_s00013p00246770

AMTR_s00013p00246770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.213

Description : Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type 1,4-beta-glucan synthase


Gene families : OG0000194 (Archaeplastida) Phylogenetic Tree(s): OG0000194_tree ,
OG_05_0000643 (LandPlants) Phylogenetic Tree(s): OG_05_0000643_tree ,
OG_06_0000676 (SeedPlants) Phylogenetic Tree(s): OG_06_0000676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00246770
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
AT4G07960 ATCSLC12, CSLC12 Cellulose-synthase-like C12 0.02 Archaeplastida
Gb_04568 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
LOC_Os07g43710.1 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Pp3c22_1440V3.1 No alias Cellulose-synthase-like C5 0.03 Archaeplastida
Solyc11g066820.2.1 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Zm00001e004807_P004 No alias mannan synthase (CSLA) 0.05 Archaeplastida
Zm00001e021557_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
Zm00001e032112_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
Zm00001e034210_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006597 spermine biosynthetic process IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
BP GO:0008215 spermine metabolic process IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
BP GO:0008295 spermidine biosynthetic process IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!